Protein ZmOrphan290
ZmOrphan290 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan290
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: K7U1W5
Subgenome: 2

Protein ZmOrphan290

ZmOrphan290 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF08879
Zm00001eb193290_T002
Zm00001eb193290_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d052125DAPseq no logo sequence fimo position
Zm00001d052125DAPseq no logo sequence fimo position
Zm00001d052125ChIPseq no logo sequence fimo position
Zm00001d052125PChIPseq no logo sequence fimo position

Interactions where ZmOrphan290 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan290 is the target  
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There are 69 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb193290_T002 from maize genome v5

Amino Acid Sequence
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MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQLQEQDDAVEQRSRCGGLGAQQRQRQGPSDGRSSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAK
ATRQQQEAKQDTGGGARRAARGPAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGR
TEHAKKTSAAAPKADVPLPLPPPSVQRC

MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQLQEQDDAVEQRSRCGGLGAQQRQRQGPSDGRSSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAK
ATRQQQEAKQDTGGGARRAARGPAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGR
TEHAKKTSAAAPKADVPLPLPPPSVQRC

MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQLQEQDDAVEQRSRCGGLGAQQRQRQGPSDGRSSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAK
ATRQQQEAKQDTGGGARRAARGPAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGR
TEHAKKTSAAAPKADVPLPLPPPSVQRC

MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQLQEQDDAVEQRSRCGGLGAQQRQRQGPSDGRSSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAK
ATRQQQEAKQDTGGGARRAARGPAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGR
TEHAKKTSAAAPKADVPLPLPPPSVQRC

MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQLQEQDDAVEQRSRCGGLGAQQRQRQGPSDGRSSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAK
ATRQQQEAKQDTGGGARRAARGPAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGR
TEHAKKTSAAAPKADVPLPLPPPSVQRC

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF08879
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Nucleotide Sequence
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ACCAAAACTAAAACGAAGGAACCAA...

GRMZM2G165991_T01 from maize genome v3

Amino Acid Sequence
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MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQLQEQDDAVEQRSRCGGLGAQQRQRQGPSDGRSSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAK
ATRQQQEAKQDTGGGARRAARGPAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGR
TEHAKKTSAAAPKADVPLPLPPPSVQRC

Nucleotide Sequence
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AAACCAACACACACAGCACAACACA...

GRMZM2G165991_T02 from maize genome v3


Related TFome: pUT6460

Amino Acid Sequence
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MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQVRALHLHLLIVIPIRVCTHSQTREGIR

Nucleotide Sequence
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GCACAACACAACACAAGCCACCCCA...

GRMZM2G165991_T03 from maize genome v3

Amino Acid Sequence
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MRTQNLKATLHLLCCSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAKATRQQQEAKQDTGGGARRAARG
PAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGRTEHAKKTSAAAPKADVPLPLPP
PSVQRC

Nucleotide Sequence
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CGCATCGCCGCGTCGGCGTCGGCGT...

Zm00001d052125_T001 from maize genome v4

Amino Acid Sequence
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MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQLQEQDDAVEQRSRCGGLGAQQRQRQGPSDGRSSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAK
ATRQQQEAKQDTGGGARRAARGPAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGR
TEHAKKTSAAAPKADVPLPLPPPSVQRC

Nucleotide Sequence
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AAACCAACACACACAGCACAACACA...

Zm00001eb193290_T001 from maize genome v5

Amino Acid Sequence
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MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQLQEQDDAVEQRSRCGGLGAQQRQRQGPSDGRSSLDNGRDCHVPEPVTIQAGERRLSNGVGAAAVATTTTATAGAK
ATRQQQEAKQDTGGGARRAARGPAGALMEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSAATGGRGPGQLGR
TEHAKKTSAAAPKADVPLPLPPPSVQRC

Nucleotide Sequence
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CCCCTCCAGGCTCCAGGCCTCTCCT...

Zm00001eb193290_T003 from maize genome v5

Amino Acid Sequence
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MRIRRRPPGQPLAYLLPSDPSAAPQSPPRASSIDRQERPPPPPGGKQGEGELHLHPATNDSPAPADLEDGRSRSSALRRP
ALLPQPRQWSRLPRAGAGDDPGRRASSQQRRRRSSGGDNDDSNSGREGDEAAARGKAGYRRRREEGRAGPCRRADGGVAV
QPEERARVAVQPADAGGLRSLPVPPRQGPYAERERRDRRARPRPARTHRAREENLRRCAQGGRAAAAAAAERAALLEARA
HGCDPSTMGNARFLDIVVGLHIILAVQWWRLEFFCCVSKH

Nucleotide Sequence
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CCCACCCCACCACCACCCCCTCCTT...


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